Vala Sciences

CyteSeer Cell and Tissue Measurements

An exhaustive list of short measurement names and their expanded long names.

Nuclear Ploidy

Short Name    <-------------->    Long Name
Cell ID    <-------------->    ID of each record
1 Well    <-------------->    Name of the well
2 Nucleus Area    <-------------->    Nucleus Area
3 Nucleus Mean Radius    <-------------->    Nucleus Mean Radius
4 Nucleus Perimeter    <-------------->    Nucleus Perimeter
5 Nucleus Roundness    <-------------->    Nucleus Roundness
6 Boundary Cell    <-------------->    Boundary Cell
7 X-Nucleus    <-------------->    X-Position of Nucleus
8 Y-Nucleus    <-------------->    Y-Position of Nucleus
9 Major Axis    <-------------->    Major Axis of Nucleus
10 Minor Axis    <-------------->    Minor Axis of Nucleus
11 Elongation    <-------------->    Elongation of Nucleus
12 Nucleus Integrated Intensity    <-------------->    Total Integrated Nucleus Intensity
13 Nucleus Average Intensity    <-------------->    Average Nucleus Intensity
14 Nucleus Std Dev Intensity    <-------------->    Standard Deviation of Nucleus Intensity
15 Nucleus Skew Intensity    <-------------->    Skewness of Nucleus Intensity
16 Nucleus Kurtosis Intensity    <-------------->    Kurtosis of Nucleus Intensity
17 Nucleus TII to StdDev Ratio    <-------------->    Ratio of Nucleus Integrated Intensity to Nucleus Standard Deviation
18 Cell Area    <-------------->    Cell Area

Lipid-Perilipin

Short Name    <-------------->    Long Name
Cell ID    <-------------->    ID of each record
1 Well    <-------------->    Name of the well
Area Nm    <-------------->    Area of Nuclear Mask
Area Cm    <-------------->    Area of Cytoplasm Mask
Area Lm    <-------------->    Area of Lipid Mask
Area Wm    <-------------->    Area of Whole-Cell Mask
XLeft Nm    <-------------->    XLeft of Nuclear Mask
YTop Nm    <-------------->    YTop of Nuclear Mask
Width Nm    <-------------->    Width of Nuclear Mask
Height Nm    <-------------->    Height of Nuclear Mask
IsBoundary Nm    <-------------->    IsBoundary of Nuclear Mask
XCentroid Nm    <-------------->    XCentroid of Nuclear Mask
YCentroid Nm    <-------------->    YCentroid of Nuclear Mask
XLeft Lm    <-------------->    XLeft of Lipid Mask
YTop Lm    <-------------->    YTop of Lipid Mask
Width Lm    <-------------->    Width of Lipid Mask
Height Lm    <-------------->    Height of Lipid Mask
IsBoundary Lm    <-------------->    IsBoundary of Lipid Mask
XCentroid Lm    <-------------->    XCentroid of Lipid Mask
YCentroid Lm    <-------------->    YCentroid of Lipid Mask
XLeft Wm    <-------------->    XLeft of Whole-Cell Mask
YTop Wm    <-------------->    YTop of Whole-Cell Mask
Width Wm    <-------------->    Width of Whole-Cell Mask
Height Wm    <-------------->    Height of Whole-Cell Mask
IsBoundary Wm    <-------------->    IsBoundary of Whole-Cell Mask
XCentroid Wm    <-------------->    XCentroid of Whole-Cell Mask
YCentroid Wm    <-------------->    YCentroid of Whole-Cell Mask
Ratio: (Area Lm) / (Area Wm)    <-------------->    Ratio: (Area of Lipid Mask) / (Area of Whole-Cell Mask)
Area X Nm    <-------------->    Area of No-Lipid Nucleus Mask
Area X Cm    <-------------->    Area of No-Lipid Cytoplasm Mask
Lipid Droplet Count    <-------------->    Lipid Droplet Count
Mean Lipid Droplet Area    <-------------->    Mean Lipid Droplet Area
Mean Lipid Droplet Diameter    <-------------->    Mean Lipid Droplet Diameter
TII Ni Nm    <-------------->    Total Integrated Intensity of Nuclear Image on Nuclear Mask
API Ni Nm    <-------------->    Average Pixel Intensity of Nuclear Image on Nuclear Mask
MPI Ni Nm    <-------------->    Median Pixel Intensity of Nuclear Image on Nuclear Mask
SPI Ni Nm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on Nuclear Mask
TII Ni Cm    <-------------->    Total Integrated Intensity of Nuclear Image on Cytoplasm Mask
API Ni Cm    <-------------->    Average Pixel Intensity of Nuclear Image on Cytoplasm Mask
MPI Ni Cm    <-------------->    Median Pixel Intensity of Nuclear Image on Cytoplasm Mask
SPI Ni Cm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on Cytoplasm Mask
TII Ni Lm    <-------------->    Total Integrated Intensity of Nuclear Image on Lipid Mask
API Ni Lm    <-------------->    Average Pixel Intensity of Nuclear Image on Lipid Mask
MPI Ni Lm    <-------------->    Median Pixel Intensity of Nuclear Image on Lipid Mask
SPI Ni Lm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on Lipid Mask
TII Ni Wm    <-------------->    Total Integrated Intensity of Nuclear Image on Whole-Cell Mask
API Ni Wm    <-------------->    Average Pixel Intensity of Nuclear Image on Whole-Cell Mask
MPI Ni Wm    <-------------->    Median Pixel Intensity of Nuclear Image on Whole-Cell Mask
SPI Ni Wm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on Whole-Cell Mask
TII Ni X Nm    <-------------->    Total Integrated Intensity of Nuclear Image on No-Lipid Nucleus Mask
API Ni X Nm    <-------------->    Average Pixel Intensity of Nuclear Image on No-Lipid Nucleus Mask
MPI Ni X Nm    <-------------->    Median Pixel Intensity of Nuclear Image on No-Lipid Nucleus Mask
SPI Ni X Nm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on No-Lipid Nucleus Mask
TII Ni X Cm    <-------------->    Total Integrated Intensity of Nuclear Image on No-Lipid Cytoplasm Mask
API Ni X Cm    <-------------->    Average Pixel Intensity of Nuclear Image on No-Lipid Cytoplasm Mask
MPI Ni X Cm    <-------------->    Median Pixel Intensity of Nuclear Image on No-Lipid Cytoplasm Mask
SPI Ni X Cm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on No-Lipid Cytoplasm Mask
TII Li Nm    <-------------->    Total Integrated Intensity of Lipid Image on Nuclear Mask
API Li Nm    <-------------->    Average Pixel Intensity of Lipid Image on Nuclear Mask
MPI Li Nm    <-------------->    Median Pixel Intensity of Lipid Image on Nuclear Mask
SPI Li Nm    <-------------->    Standard Deviation of Pixel Intensity of Lipid Image on Nuclear Mask
TII Li Cm    <-------------->    Total Integrated Intensity of Lipid Image on Cytoplasm Mask
API Li Cm    <-------------->    Average Pixel Intensity of Lipid Image on Cytoplasm Mask
MPI Li Cm    <-------------->    Median Pixel Intensity of Lipid Image on Cytoplasm Mask
SPI Li Cm    <-------------->    Standard Deviation of Pixel Intensity of Lipid Image on Cytoplasm Mask
TII Li Lm    <-------------->    Total Integrated Intensity of Lipid Image on Lipid Mask
API Li Lm    <-------------->    Average Pixel Intensity of Lipid Image on Lipid Mask
MPI Li Lm    <-------------->    Median Pixel Intensity of Lipid Image on Lipid Mask
SPI Li Lm    <-------------->    Standard Deviation of Pixel Intensity of Lipid Image on Lipid Mask
TII Li Wm    <-------------->    Total Integrated Intensity of Lipid Image on Whole-Cell Mask
API Li Wm    <-------------->    Average Pixel Intensity of Lipid Image on Whole-Cell Mask
MPI Li Wm    <-------------->    Median Pixel Intensity of Lipid Image on Whole-Cell Mask
SPI Li Wm    <-------------->    Standard Deviation of Pixel Intensity of Lipid Image on Whole-Cell Mask
TII Li X Nm    <-------------->    Total Integrated Intensity of Lipid Image on No-Lipid Nucleus Mask
API Li X Nm    <-------------->    Average Pixel Intensity of Lipid Image on No-Lipid Nucleus Mask
MPI Li X Nm    <-------------->    Median Pixel Intensity of Lipid Image on No-Lipid Nucleus Mask
SPI Li X Nm    <-------------->    Standard Deviation of Pixel Intensity of Lipid Image on No-Lipid Nucleus Mask
TII Li X Cm    <-------------->    Total Integrated Intensity of Lipid Image on No-Lipid Cytoplasm Mask
API Li X Cm    <-------------->    Average Pixel Intensity of Lipid Image on No-Lipid Cytoplasm Mask
MPI Li X Cm    <-------------->    Median Pixel Intensity of Lipid Image on No-Lipid Cytoplasm Mask
SPI Li X Cm    <-------------->    Standard Deviation of Pixel Intensity of Lipid Image on No-Lipid Cytoplasm Mask
Diff: (MPI Li Lm) - (MPI Li X Cm)    <-------------->    Difference: (Median Pixel Intensity of Lipid Image on Lipid Mask) - (Median Pixel Intensity of Lipid Image on No-Lipid Cytoplasm Mask)
Ratio: (MPI Li Lm) / (MPI Li X Cm)    <-------------->    Ratio: (Median Pixel Intensity of Lipid Image on Lipid Mask) / (Median Pixel Intensity of Lipid Image on No-Lipid Cytoplasm Mask)

Skeletal Muscle

Short Name    <-------------->    Long Name
Cell ID    <-------------->    ID of each record
Well    <-------------->    Name of the well
Area Mm    <-------------->    Area of Membrane Mask
Area Tm    <-------------->    Area of Thick Membrane Mask
Area Wm    <-------------->    Area of Whole-Cell Mask
Area Fm    <-------------->    Area of Fiber Mask
XLeft Mm    <-------------->    XLeft of Membrane Mask
YTop Mm    <-------------->    YTop of Membrane Mask
Width Mm    <-------------->    Width of Membrane Mask
Height Mm    <-------------->    Height of Membrane Mask
IsBoundary Mm    <-------------->    IsBoundary of Membrane Mask
XCentroid Mm    <-------------->    XCentroid of Membrane Mask
YCentroid Mm    <-------------->    YCentroid of Membrane Mask
XLeft Tm    <-------------->    XLeft of Thick Membrane Mask
YTop Tm    <-------------->    YTop of Thick Membrane Mask
Width Tm    <-------------->    Width of Thick Membrane Mask
Height Tm    <-------------->    Height of Thick Membrane Mask
IsBoundary Tm    <-------------->    IsBoundary of Thick Membrane Mask
XCentroid Tm    <-------------->    XCentroid of Thick Membrane Mask
YCentroid Tm    <-------------->    YCentroid of Thick Membrane Mask
XLeft Wm    <-------------->    XLeft of Whole-Cell Mask
YTop Wm    <-------------->    YTop of Whole-Cell Mask
Width Wm    <-------------->    Width of Whole-Cell Mask
Height Wm    <-------------->    Height of Whole-Cell Mask
IsBoundary Wm    <-------------->    IsBoundary of Whole-Cell Mask
XCentroid Wm    <-------------->    XCentroid of Whole-Cell Mask
YCentroid Wm    <-------------->    YCentroid of Whole-Cell Mask
XLeft Fm    <-------------->    XLeft of Fiber Mask
YTop Fm    <-------------->    YTop of Fiber Mask
Width Fm    <-------------->    Width of Fiber Mask
Height Fm    <-------------->    Height of Fiber Mask
IsBoundary Fm    <-------------->    IsBoundary of Fiber Mask
XCentroid Fm    <-------------->    XCentroid of Fiber Mask
YCentroid Fm    <-------------->    YCentroid of Fiber Mask
Cell Mean Radius    <-------------->    Cell Mean Radius
Cell Perimeter    <-------------->    Cell Perimeter
Cell Roundness    <-------------->    Cell Roundness
Boundary Cell    <-------------->    Boundary Cell
X-Cell    <-------------->    X-Position of Cell
Y-Cell    <-------------->    Y-Position of Cell
Cell Major Axis    <-------------->    Major Axis of Cell
Cell Minor Axis    <-------------->    Minor Axis of Cell
Cell Elongation    <-------------->    Elongation of Cell
Fiber Mean Radius    <-------------->    Fiber Mean Radius
Fiber Perimeter    <-------------->    Fiber Perimeter
Fiber Roundness    <-------------->    Fiber Roundness
X-Fiber    <-------------->    X-Position of Fiber
Y-Fiber    <-------------->    Y-Position of Fiber
Fiber Major Axis    <-------------->    Major Axis of Fiber
Fiber Minor Axis    <-------------->    Minor Axis of Fiber
Fiber Elongation    <-------------->    Elongation of Fiber
TII Mi Mm    <-------------->    Total Integrated Intensity of Muscle Image on Membrane Mask
API Mi Mm    <-------------->    Average Pixel Intensity of Muscle Image on Membrane Mask
MPI Mi Mm    <-------------->    Median Pixel Intensity of Muscle Image on Membrane Mask
SPI Mi Mm    <-------------->    Standard Deviation of Pixel Intensity of Muscle Image on Membrane Mask
TII Mi Tm    <-------------->    Total Integrated Intensity of Muscle Image on Thick Membrane Mask
API Mi Tm    <-------------->    Average Pixel Intensity of Muscle Image on Thick Membrane Mask
MPI Mi Tm    <-------------->    Median Pixel Intensity of Muscle Image on Thick Membrane Mask
SPI Mi Tm    <-------------->    Standard Deviation of Pixel Intensity of Muscle Image on Thick Membrane Mask
Cell Muscle Integrated Intensity    <-------------->    Total Integrated Muscle Intensity on Cell
Cell Muscle Average Intensity    <-------------->    Average Muscle Intensity on Cell
Cell Muscle Std Dev Intensity    <-------------->    Standard Deviation of Muscle Intensity on Cell
Cell Skew Intensity    <-------------->    Skewness of Muscle Intensity on Cell
Cell Kurtosis Intensity    <-------------->    Kurtosis of Muscle Intensity on Cell
Cell TII to StdDev Ratio    <-------------->    Ratio of Muscle Integrated Intensity to Muscle Standard Deviation on Cell
Fiber Muscle Integrated Intensity    <-------------->    Total Integrated Muscle Intensity on Fiber
Fiber Muscle Average Intensity    <-------------->    Average Muscle Intensity on Fiber
Fiber Muscle Std Dev Intensity    <-------------->    Standard Deviation of Muscle Intensity on Fiber
Fiber Skew Intensity    <-------------->    Skewness of Muscle Intensity on Fiber
Fiber Kurtosis Intensity    <-------------->    Kurtosis of Muscle Intensity on Fiber
Fiber TII to StdDev Ratio    <-------------->    Ratio of Muscle Integrated Intensity to Muscle Standard Deviation on Fiber
Protein-1 TII    <-------------->    Total Integrated Intensity of Protein-1
Protein-1 API    <-------------->    Average Intensity of Protein-1
Protein-1 MPI    <-------------->    Median Intensity of Protein-1
Protein-1 SPI    <-------------->    SD Intensity of Protein-1
Protein-1 Skewness    <-------------->    Skewness of Intensity of Protein-1
Protein-1 Kurtosis    <-------------->    Kurtosis of Intensity of Protein-1
Protein-1 Edge TII    <-------------->    Total Integrated Edge Intensity of Protein-1
Protein-1 Edge API    <-------------->    Average Edge Intensity of Protein-1
Protein-1 Edge MPI    <-------------->    Median Edge Intensity of Protein-1
Protein-1 Edge SPI    <-------------->    SD Edge Intensity of Protein-1

Co-Localization

Short Name    <-------------->    Long Name
Cell ID    <-------------->    ID of each record
1 Well    <-------------->    Name of the well
Area Nm    <-------------->    Area of Nuclear Mask
Area Lm    <-------------->    Area of Lipid Mask
Area Wm    <-------------->    Area of Whole-Cell Mask
XLeft Nm    <-------------->    XLeft of Nuclear Mask
YTop Nm    <-------------->    YTop of Nuclear Mask
Width Nm    <-------------->    Width of Nuclear Mask
Height Nm    <-------------->    Height of Nuclear Mask
IsBoundary Nm    <-------------->    IsBoundary of Nuclear Mask
XCentroid Nm    <-------------->    XCentroid of Nuclear Mask
YCentroid Nm    <-------------->    YCentroid of Nuclear Mask
XLeft Lm    <-------------->    XLeft of Lipid Mask
YTop Lm    <-------------->    YTop of Lipid Mask
Width Lm    <-------------->    Width of Lipid Mask
Height Lm    <-------------->    Height of Lipid Mask
IsBoundary Lm    <-------------->    IsBoundary of Lipid Mask
XCentroid Lm    <-------------->    XCentroid of Lipid Mask
YCentroid Lm    <-------------->    YCentroid of Lipid Mask
XLeft Wm    <-------------->    XLeft of Whole-Cell Mask
YTop Wm    <-------------->    YTop of Whole-Cell Mask
Width Wm    <-------------->    Width of Whole-Cell Mask
Height Wm    <-------------->    Height of Whole-Cell Mask
IsBoundary Wm    <-------------->    IsBoundary of Whole-Cell Mask
XCentroid Wm    <-------------->    XCentroid of Whole-Cell Mask
YCentroid Wm    <-------------->    YCentroid of Whole-Cell Mask
Ratio: (Area Lm) / (Area Wm)    <-------------->    Ratio: (Area of Lipid Mask) / (Area of Whole-Cell Mask)
Area Pm    <-------------->    Area of Protein Mask
Area Cm    <-------------->    Area of Cytoplasm Mask
Area X Nm    <-------------->    Area of No-Lipid Nucleus Mask
Area X Cm    <-------------->    Area of No-Lipid Cytoplasm Mask
Area Q Nm    <-------------->    Area of No-Protein Nucleus Mask
Area Q Cm    <-------------->    Area of No-Protein Cytoplasm Mask
Lipid Droplet Count    <-------------->    Lipid Droplet Count
Mean Lipid Droplet Area    <-------------->    Mean Lipid Droplet Area
Mean Lipid Droplet Diameter    <-------------->    Mean Lipid Droplet Diameter
TII Pi Nm    <-------------->    Total Integrated Intensity of Protein Image on Nuclear Mask
API Pi Nm    <-------------->    Average Pixel Intensity of Protein Image on Nuclear Mask
MPI Pi Nm    <-------------->    Median Pixel Intensity of Protein Image on Nuclear Mask
SPI Pi Nm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on Nuclear Mask
TII Pi Wm    <-------------->    Total Integrated Intensity of Protein Image on Whole-Cell Mask
API Pi Wm    <-------------->    Average Pixel Intensity of Protein Image on Whole-Cell Mask
MPI Pi Wm    <-------------->    Median Pixel Intensity of Protein Image on Whole-Cell Mask
SPI Pi Wm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on Whole-Cell Mask
TII Li Nm    <-------------->    Total Integrated Intensity of Lipid Image on Nuclear Mask
API Li Nm    <-------------->    Average Pixel Intensity of Lipid Image on Nuclear Mask
MPI Li Nm    <-------------->    Median Pixel Intensity of Lipid Image on Nuclear Mask
SPI Li Nm    <-------------->    Standard Deviation of Pixel Intensity of Lipid Image on Nuclear Mask
TII Li Wm    <-------------->    Total Integrated Intensity of Lipid Image on Whole-Cell Mask
API Li Wm    <-------------->    Average Pixel Intensity of Lipid Image on Whole-Cell Mask
MPI Li Wm    <-------------->    Median Pixel Intensity of Lipid Image on Whole-Cell Mask
SPI Li Wm    <-------------->    Standard Deviation of Pixel Intensity of Lipid Image on Whole-Cell Mask
TII Li Lm    <-------------->    Total Integrated Intensity of Lipid Image on Lipid Mask
API Li Lm    <-------------->    Average Pixel Intensity of Lipid Image on Lipid Mask
MPI Li Lm    <-------------->    Median Pixel Intensity of Lipid Image on Lipid Mask
SPI Li Lm    <-------------->    Standard Deviation of Pixel Intensity of Lipid Image on Lipid Mask
TII Li X Nm    <-------------->    Total Integrated Intensity of Lipid Image on No-Lipid Nucleus Mask
API Li X Nm    <-------------->    Average Pixel Intensity of Lipid Image on No-Lipid Nucleus Mask
MPI Li X Nm    <-------------->    Median Pixel Intensity of Lipid Image on No-Lipid Nucleus Mask
SPI Li X Nm    <-------------->    Standard Deviation of Pixel Intensity of Lipid Image on No-Lipid Nucleus Mask
TII Li X Cm    <-------------->    Total Integrated Intensity of Lipid Image on No-Lipid Cytoplasm Mask
API Li X Cm    <-------------->    Average Pixel Intensity of Lipid Image on No-Lipid Cytoplasm Mask
MPI Li X Cm    <-------------->    Median Pixel Intensity of Lipid Image on No-Lipid Cytoplasm Mask
SPI Li X Cm    <-------------->    Standard Deviation of Pixel Intensity of Lipid Image on No-Lipid Cytoplasm Mask
Diff: (MPI Li Lm) - (MPI Li X Cm)    <-------------->    Difference: (Median Pixel Intensity of Lipid Image on Lipid Mask) - (Median Pixel Intensity of Lipid Image on No-Lipid Cytoplasm Mask)
Ratio: (MPI Li Lm) / (MPI Li X Cm)    <-------------->    Ratio: (Median Pixel Intensity of Lipid Image on Lipid Mask) / (Median Pixel Intensity of Lipid Image on No-Lipid Cytoplasm Mask)
TII Pi Pm    <-------------->    Total Integrated Intensity of Protein Image on Protein Mask
API Pi Pm    <-------------->    Average Pixel Intensity of Protein Image on Protein Mask
MPI Pi Pm    <-------------->    Median Pixel Intensity of Protein Image on Protein Mask
SPI Pi Pm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on Protein Mask
TII Pi Lm    <-------------->    Total Integrated Intensity of Protein Image on Lipid Mask
API Pi Lm    <-------------->    Average Pixel Intensity of Protein Image on Lipid Mask
MPI Pi Lm    <-------------->    Median Pixel Intensity of Protein Image on Lipid Mask
SPI Pi Lm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on Lipid Mask
TII Pi Cm    <-------------->    Total Integrated Intensity of Protein Image on Cytoplasm Mask
API Pi Cm    <-------------->    Average Pixel Intensity of Protein Image on Cytoplasm Mask
MPI Pi Cm    <-------------->    Median Pixel Intensity of Protein Image on Cytoplasm Mask
SPI Pi Cm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on Cytoplasm Mask
TII Pi Q Nm    <-------------->    Total Integrated Intensity of Protein Image on No-Protein Nucleus Mask
API Pi Q Nm    <-------------->    Average Pixel Intensity of Protein Image on No-Protein Nucleus Mask
MPI Pi Q Nm    <-------------->    Median Pixel Intensity of Protein Image on No-Protein Nucleus Mask
SPI Pi Q Nm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on No-Protein Nucleus Mask
TII Pi Q Cm    <-------------->    Total Integrated Intensity of Protein Image on No-Protein Cytoplasm Mask
API Pi Q Cm    <-------------->    Average Pixel Intensity of Protein Image on No-Protein Cytoplasm Mask
MPI Pi Q Cm    <-------------->    Median Pixel Intensity of Protein Image on No-Protein Cytoplasm Mask
SPI Pi Q Cm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on No-Protein Cytoplasm Mask
Diff: (MPI Pi Pm) - (MPI Pi Q Cm)    <-------------->    Difference: (Median Pixel Intensity of Protein Image on Protein Mask) - (Median Pixel Intensity of Protein Image on No-Protein Cytoplasm Mask)
Ratio: (MPI Pi Pm) / (MPI Pi Q Cm)    <-------------->    Ratio: (Median Pixel Intensity of Protein Image on Protein Mask) / (Median Pixel Intensity of Protein Image on No-Protein Cytoplasm Mask)
PCC Li Pi Wm    <-------------->    Pearson Correlation Coefficient of Lipid Image vs Protein Image on Whole-Cell Mask
K1 Li Pi Wm    <-------------->    Manders K1 Coefficient of Lipid Image vs Protein Image on Whole-Cell Mask
K2 Li Pi Wm    <-------------->    Manders K2 Coefficient of Lipid Image vs Protein Image on Whole-Cell Mask
MOC Li Pi Wm    <-------------->    Manders Overlap Coefficient of Lipid Image vs Protein Image on Whole-Cell Mask
M1 Li Pi Wm    <-------------->    Manders M1 Coefficient of Lipid Image vs Protein Image on Whole-Cell Mask
M2 Li Pi Wm    <-------------->    Manders M2 Coefficient of Lipid Image vs Protein Image on Whole-Cell Mask
Masked PCC Li Pi Wm    <-------------->    Masked Pearson Correlation Coefficient of Lipid Image vs Protein Image on Whole-Cell Mask
Masked K1 Li Pi Wm    <-------------->    Masked Manders K1 Coefficient of Lipid Image vs Protein Image on Whole-Cell Mask
Masked K2 Li Pi Wm    <-------------->    Masked Manders K2 Coefficient of Lipid Image vs Protein Image on Whole-Cell Mask
Masked MOC Li Pi Wm    <-------------->    Masked Manders Overlap Coefficient of Lipid Image vs Protein Image on Whole-Cell Mask
Masked M1 Li Pi Wm    <-------------->    Masked Manders M1 Coefficient of Lipid Image vs Protein Image on Whole-Cell Mask
Masked M2 Li Pi Wm    <-------------->    Masked Manders M2 Coefficient of Lipid Image vs Protein Image on Whole-Cell Mask

Protein Expression

Short Name    <-------------->    Long Name
Cell ID    <-------------->    ID of each record
1 Well    <-------------->    Name of the well
Area Nm    <-------------->    Area of Nuclear Mask
Area Cm    <-------------->    Area of Cytoplasm Mask
Area Pm    <-------------->    Area of Protein Mask
Area Wm    <-------------->    Area of Whole-Cell Mask
XLeft Nm    <-------------->    XLeft of Nuclear Mask
YTop Nm    <-------------->    YTop of Nuclear Mask
Width Nm    <-------------->    Width of Nuclear Mask
Height Nm    <-------------->    Height of Nuclear Mask
IsBoundary Nm    <-------------->    IsBoundary of Nuclear Mask
XCentroid Nm    <-------------->    XCentroid of Nuclear Mask
YCentroid Nm    <-------------->    YCentroid of Nuclear Mask
XLeft Pm    <-------------->    XLeft of Protein Mask
YTop Pm    <-------------->    YTop of Protein Mask
Width Pm    <-------------->    Width of Protein Mask
Height Pm    <-------------->    Height of Protein Mask
IsBoundary Pm    <-------------->    IsBoundary of Protein Mask
XCentroid Pm    <-------------->    XCentroid of Protein Mask
YCentroid Pm    <-------------->    YCentroid of Protein Mask
XLeft Wm    <-------------->    XLeft of Whole-Cell Mask
YTop Wm    <-------------->    YTop of Whole-Cell Mask
Width Wm    <-------------->    Width of Whole-Cell Mask
Height Wm    <-------------->    Height of Whole-Cell Mask
IsBoundary Wm    <-------------->    IsBoundary of Whole-Cell Mask
XCentroid Wm    <-------------->    XCentroid of Whole-Cell Mask
YCentroid Wm    <-------------->    YCentroid of Whole-Cell Mask
Ratio: (Area Pm) / (Area Wm)    <-------------->    Ratio: (Area of Protein Mask) / (Area of Whole-Cell Mask)
Area X Nm    <-------------->    Area of No-Protein Nucleus Mask
Area X Cm    <-------------->    Area of No-Protein Cytoplasm Mask
Protein Droplet Count    <-------------->    Protein Droplet Count
Mean Protein Droplet Area    <-------------->    Mean Protein Droplet Area
Mean Protein Droplet Diameter    <-------------->    Mean Protein Droplet Diameter
TII Ni Nm    <-------------->    Total Integrated Intensity of Nuclear Image on Nuclear Mask
API Ni Nm    <-------------->    Average Pixel Intensity of Nuclear Image on Nuclear Mask
MPI Ni Nm    <-------------->    Median Pixel Intensity of Nuclear Image on Nuclear Mask
SPI Ni Nm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on Nuclear Mask
TII Ni Cm    <-------------->    Total Integrated Intensity of Nuclear Image on Cytoplasm Mask
API Ni Cm    <-------------->    Average Pixel Intensity of Nuclear Image on Cytoplasm Mask
MPI Ni Cm    <-------------->    Median Pixel Intensity of Nuclear Image on Cytoplasm Mask
SPI Ni Cm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on Cytoplasm Mask
TII Ni Pm    <-------------->    Total Integrated Intensity of Nuclear Image on Protein Mask
API Ni Pm    <-------------->    Average Pixel Intensity of Nuclear Image on Protein Mask
MPI Ni Pm    <-------------->    Median Pixel Intensity of Nuclear Image on Protein Mask
SPI Ni Pm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on Protein Mask
TII Ni Wm    <-------------->    Total Integrated Intensity of Nuclear Image on Whole-Cell Mask
API Ni Wm    <-------------->    Average Pixel Intensity of Nuclear Image on Whole-Cell Mask
MPI Ni Wm    <-------------->    Median Pixel Intensity of Nuclear Image on Whole-Cell Mask
SPI Ni Wm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on Whole-Cell Mask
TII Ni X Nm    <-------------->    Total Integrated Intensity of Nuclear Image on No-Protein Nucleus Mask
API Ni X Nm    <-------------->    Average Pixel Intensity of Nuclear Image on No-Protein Nucleus Mask
MPI Ni X Nm    <-------------->    Median Pixel Intensity of Nuclear Image on No-Protein Nucleus Mask
SPI Ni X Nm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on No-Protein Nucleus Mask
TII Ni X Cm    <-------------->    Total Integrated Intensity of Nuclear Image on No-Protein Cytoplasm Mask
API Ni X Cm    <-------------->    Average Pixel Intensity of Nuclear Image on No-Protein Cytoplasm Mask
MPI Ni X Cm    <-------------->    Median Pixel Intensity of Nuclear Image on No-Protein Cytoplasm Mask
SPI Ni X Cm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on No-Protein Cytoplasm Mask
TII Pi Nm    <-------------->    Total Integrated Intensity of Protein Image on Nuclear Mask
API Pi Nm    <-------------->    Average Pixel Intensity of Protein Image on Nuclear Mask
MPI Pi Nm    <-------------->    Median Pixel Intensity of Protein Image on Nuclear Mask
SPI Pi Nm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on Nuclear Mask
TII Pi Cm    <-------------->    Total Integrated Intensity of Protein Image on Cytoplasm Mask
API Pi Cm    <-------------->    Average Pixel Intensity of Protein Image on Cytoplasm Mask
MPI Pi Cm    <-------------->    Median Pixel Intensity of Protein Image on Cytoplasm Mask
SPI Pi Cm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on Cytoplasm Mask
TII Pi Pm    <-------------->    Total Integrated Intensity of Protein Image on Protein Mask
API Pi Pm    <-------------->    Average Pixel Intensity of Protein Image on Protein Mask
MPI Pi Pm    <-------------->    Median Pixel Intensity of Protein Image on Protein Mask
SPI Pi Pm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on Protein Mask
TII Pi Wm    <-------------->    Total Integrated Intensity of Protein Image on Whole-Cell Mask
API Pi Wm    <-------------->    Average Pixel Intensity of Protein Image on Whole-Cell Mask
MPI Pi Wm    <-------------->    Median Pixel Intensity of Protein Image on Whole-Cell Mask
SPI Pi Wm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on Whole-Cell Mask
TII Pi X Nm    <-------------->    Total Integrated Intensity of Protein Image on No-Protein Nucleus Mask
API Pi X Nm    <-------------->    Average Pixel Intensity of Protein Image on No-Protein Nucleus Mask
MPI Pi X Nm    <-------------->    Median Pixel Intensity of Protein Image on No-Protein Nucleus Mask
SPI Pi X Nm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on No-Protein Nucleus Mask
TII Pi X Cm    <-------------->    Total Integrated Intensity of Protein Image on No-Protein Cytoplasm Mask
API Pi X Cm    <-------------->    Average Pixel Intensity of Protein Image on No-Protein Cytoplasm Mask
MPI Pi X Cm    <-------------->    Median Pixel Intensity of Protein Image on No-Protein Cytoplasm Mask
SPI Pi X Cm    <-------------->    Standard Deviation of Pixel Intensity of Protein Image on No-Protein Cytoplasm Mask
Diff: (MPI Pi Pm) - (MPI Pi X Cm)    <-------------->    Difference: (Median Pixel Intensity of Protein Image on Protein Mask) - (Median Pixel Intensity of Protein Image on No-Protein Cytoplasm Mask)
Ratio: (MPI Pi Pm) / (MPI Pi X Cm)    <-------------->    Ratio: (Median Pixel Intensity of Protein Image on Protein Mask) / (Median Pixel Intensity of Protein Image on No-Protein Cytoplasm Mask)
PCC Ni Pi Nm    <-------------->    Pearson Correlation Coefficient of Nuclear Image vs Protein Image on Nuclear Mask
K1 Ni Pi Nm    <-------------->    Manders K1 Coefficient of Nuclear Image vs Protein Image on Nuclear Mask
K2 Ni Pi Nm    <-------------->    Manders K2 Coefficient of Nuclear Image vs Protein Image on Nuclear Mask
MOC Ni Pi Nm    <-------------->    Manders Overlap Coefficient of Nuclear Image vs Protein Image on Nuclear Mask
M1 Ni Pi Nm    <-------------->    Manders M1 Coefficient of Nuclear Image vs Protein Image on Nuclear Mask
M2 Ni Pi Nm    <-------------->    Manders M2 Coefficient of Nuclear Image vs Protein Image on Nuclear Mask
PCC Ni Pi Pm    <-------------->    Pearson Correlation Coefficient of Nuclear Image vs Protein Image on Protein Mask
K1 Ni Pi Pm    <-------------->    Manders K1 Coefficient of Nuclear Image vs Protein Image on Protein Mask
K2 Ni Pi Pm    <-------------->    Manders K2 Coefficient of Nuclear Image vs Protein Image on Protein Mask
MOC Ni Pi Pm    <-------------->    Manders Overlap Coefficient of Nuclear Image vs Protein Image on Protein Mask
M1 Ni Pi Pm    <-------------->    Manders M1 Coefficient of Nuclear Image vs Protein Image on Protein Mask
M2 Ni Pi Pm    <-------------->    Manders M2 Coefficient of Nuclear Image vs Protein Image on Protein Mask
PCC Ni Pi Cm    <-------------->    Pearson Correlation Coefficient of Nuclear Image vs Protein Image on Cytoplasm Mask
K1 Ni Pi Cm    <-------------->    Manders K1 Coefficient of Nuclear Image vs Protein Image on Cytoplasm Mask
K2 Ni Pi Cm    <-------------->    Manders K2 Coefficient of Nuclear Image vs Protein Image on Cytoplasm Mask
MOC Ni Pi Cm    <-------------->    Manders Overlap Coefficient of Nuclear Image vs Protein Image on Cytoplasm Mask
M1 Ni Pi Cm    <-------------->    Manders M1 Coefficient of Nuclear Image vs Protein Image on Cytoplasm Mask
M2 Ni Pi Cm    <-------------->    Manders M2 Coefficient of Nuclear Image vs Protein Image on Cytoplasm Mask
PCC Ni Pi Wm    <-------------->    Pearson Correlation Coefficient of Nuclear Image vs Protein Image on Whole-Cell Mask
K1 Ni Pi Wm    <-------------->    Manders K1 Coefficient of Nuclear Image vs Protein Image on Whole-Cell Mask
K2 Ni Pi Wm    <-------------->    Manders K2 Coefficient of Nuclear Image vs Protein Image on Whole-Cell Mask
MOC Ni Pi Wm    <-------------->    Manders Overlap Coefficient of Nuclear Image vs Protein Image on Whole-Cell Mask
M1 Ni Pi Wm    <-------------->    Manders M1 Coefficient of Nuclear Image vs Protein Image on Whole-Cell Mask
M2 Ni Pi Wm    <-------------->    Manders M2 Coefficient of Nuclear Image vs Protein Image on Whole-Cell Mask
Masked PCC Ni Pi Nm    <-------------->    Masked Pearson Correlation Coefficient of Nuclear Image vs Protein Image on Nuclear Mask
Masked K1 Ni Pi Nm    <-------------->    Masked Manders K1 Coefficient of Nuclear Image vs Protein Image on Nuclear Mask
Masked K2 Ni Pi Nm    <-------------->    Masked Manders K2 Coefficient of Nuclear Image vs Protein Image on Nuclear Mask
Masked MOC Ni Pi Nm    <-------------->    Masked Manders Overlap Coefficient of Nuclear Image vs Protein Image on Nuclear Mask
Masked M1 Ni Pi Nm    <-------------->    Masked Manders M1 Coefficient of Nuclear Image vs Protein Image on Nuclear Mask
Masked M2 Ni Pi Nm    <-------------->    Masked Manders M2 Coefficient of Nuclear Image vs Protein Image on Nuclear Mask
Masked PCC Ni Pi Pm    <-------------->    Masked Pearson Correlation Coefficient of Nuclear Image vs Protein Image on Protein Mask
Masked K1 Ni Pi Pm    <-------------->    Masked Manders K1 Coefficient of Nuclear Image vs Protein Image on Protein Mask
Masked K2 Ni Pi Pm    <-------------->    Masked Manders K2 Coefficient of Nuclear Image vs Protein Image on Protein Mask
Masked MOC Ni Pi Pm    <-------------->    Masked Manders Overlap Coefficient of Nuclear Image vs Protein Image on Protein Mask
Masked M1 Ni Pi Pm    <-------------->    Masked Manders M1 Coefficient of Nuclear Image vs Protein Image on Protein Mask
Masked M2 Ni Pi Pm    <-------------->    Masked Manders M2 Coefficient of Nuclear Image vs Protein Image on Protein Mask
Masked PCC Ni Pi Cm    <-------------->    Masked Pearson Correlation Coefficient of Nuclear Image vs Protein Image on Cytoplasm Mask
Masked K1 Ni Pi Cm    <-------------->    Masked Manders K1 Coefficient of Nuclear Image vs Protein Image on Cytoplasm Mask
Masked K2 Ni Pi Cm    <-------------->    Masked Manders K2 Coefficient of Nuclear Image vs Protein Image on Cytoplasm Mask
Masked MOC Ni Pi Cm    <-------------->    Masked Manders Overlap Coefficient of Nuclear Image vs Protein Image on Cytoplasm Mask
Masked M1 Ni Pi Cm    <-------------->    Masked Manders M1 Coefficient of Nuclear Image vs Protein Image on Cytoplasm Mask
Masked M2 Ni Pi Cm    <-------------->    Masked Manders M2 Coefficient of Nuclear Image vs Protein Image on Cytoplasm Mask
Masked PCC Ni Pi Wm    <-------------->    Masked Pearson Correlation Coefficient of Nuclear Image vs Protein Image on Whole-Cell Mask
Masked K1 Ni Pi Wm    <-------------->    Masked Manders K1 Coefficient of Nuclear Image vs Protein Image on Whole-Cell Mask
Masked K2 Ni Pi Wm    <-------------->    Masked Manders K2 Coefficient of Nuclear Image vs Protein Image on Whole-Cell Mask
Masked MOC Ni Pi Wm    <-------------->    Masked Manders Overlap Coefficient of Nuclear Image vs Protein Image on Whole-Cell Mask
Masked M1 Ni Pi Wm    <-------------->    Masked Manders M1 Coefficient of Nuclear Image vs Protein Image on Whole-Cell Mask
Masked M2 Ni Pi Wm    <-------------->    Masked Manders M2 Coefficient of Nuclear Image vs Protein Image on Whole-Cell Mask

Lipid Droplets

Short Name    <-------------->    Long Name
Cell ID    <-------------->    ID of each record
1 Well    <-------------->    Name of the well
Area Nm    <-------------->    Area of Nuclear Mask
Area Cm    <-------------->    Area of Cytoplasm Mask
Area Lm    <-------------->    Area of Lipid Mask
Area Wm    <-------------->    Area of Whole-Cell Mask
XLeft Nm    <-------------->    XLeft of Nuclear Mask
YTop Nm    <-------------->    YTop of Nuclear Mask
Width Nm    <-------------->    Width of Nuclear Mask
Height Nm    <-------------->    Height of Nuclear Mask
IsBoundary Nm    <-------------->    IsBoundary of Nuclear Mask
XCentroid Nm    <-------------->    XCentroid of Nuclear Mask
YCentroid Nm    <-------------->    YCentroid of Nuclear Mask
XLeft Lm    <-------------->    XLeft of Lipid Mask
YTop Lm    <-------------->    YTop of Lipid Mask
Width Lm    <-------------->    Width of Lipid Mask
Height Lm    <-------------->    Height of Lipid Mask
IsBoundary Lm    <-------------->    IsBoundary of Lipid Mask
XCentroid Lm    <-------------->    XCentroid of Lipid Mask
YCentroid Lm    <-------------->    YCentroid of Lipid Mask
XLeft Wm    <-------------->    XLeft of Whole-Cell Mask
YTop Wm    <-------------->    YTop of Whole-Cell Mask
Width Wm    <-------------->    Width of Whole-Cell Mask
Height Wm    <-------------->    Height of Whole-Cell Mask
IsBoundary Wm    <-------------->    IsBoundary of Whole-Cell Mask
XCentroid Wm    <-------------->    XCentroid of Whole-Cell Mask
YCentroid Wm    <-------------->    YCentroid of Whole-Cell Mask
Ratio: (Area Lm) / (Area Wm)    <-------------->    Ratio: (Area of Lipid Mask) / (Area of Whole-Cell Mask)
Area X Nm    <-------------->    Area of No-Lipid Nucleus Mask
Area X Cm    <-------------->    Area of No-Lipid Cytoplasm Mask
Lipid Droplet Count    <-------------->    Lipid Droplet Count
Mean Lipid Droplet Area    <-------------->    Mean Lipid Droplet Area
Mean Lipid Droplet Diameter    <-------------->    Mean Lipid Droplet Diameter
TII Ni Nm    <-------------->    Total Integrated Intensity of Nuclear Image on Nuclear Mask
API Ni Nm    <-------------->    Average Pixel Intensity of Nuclear Image on Nuclear Mask
MPI Ni Nm    <-------------->    Median Pixel Intensity of Nuclear Image on Nuclear Mask
SPI Ni Nm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on Nuclear Mask
TII Ni Cm    <-------------->    Total Integrated Intensity of Nuclear Image on Cytoplasm Mask
API Ni Cm    <-------------->    Average Pixel Intensity of Nuclear Image on Cytoplasm Mask
MPI Ni Cm    <-------------->    Median Pixel Intensity of Nuclear Image on Cytoplasm Mask
SPI Ni Cm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on Cytoplasm Mask
TII Ni Lm    <-------------->    Total Integrated Intensity of Nuclear Image on Lipid Mask
API Ni Lm    <-------------->    Average Pixel Intensity of Nuclear Image on Lipid Mask
MPI Ni Lm    <-------------->    Median Pixel Intensity of Nuclear Image on Lipid Mask
SPI Ni Lm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on Lipid Mask
TII Ni Wm    <-------------->    Total Integrated Intensity of Nuclear Image on Whole-Cell Mask
API Ni Wm    <-------------->    Average Pixel Intensity of Nuclear Image on Whole-Cell Mask
MPI Ni Wm    <-------------->    Median Pixel Intensity of Nuclear Image on Whole-Cell Mask
SPI Ni Wm    <-------------->    Standard Deviation of Pixel Intensity of Nuclear Image on Whole-Cell Mask
TII Ni X Nm    <-------------->    Total Integrated Intensity of Nuclear Image on No-Lipid Nucleus Mask
API Ni X Nm    <-------------->    Average Pixel Intensity of Nuclear Image on No-Lipid Nucleus Mask
MPI Ni X Nm    <-------------->    Median Pixel Intensity of Nuclear Image on No-Lipid Nucleus Mask
SPI Ni X Nm    <-------------->    Standard Deviation of Pixel Int

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